Last updated on 2025-12-16 19:50:33 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.0 | 197.23 | 1063.56 | 1260.79 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.0 | 191.04 | 834.44 | 1025.48 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.1.0 | 291.00 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.0 | 480.00 | 5617.29 | 6097.29 | ERROR | |
| r-devel-windows-x86_64 | 0.1.0 | 198.00 | 751.00 | 949.00 | OK | |
| r-patched-linux-x86_64 | 0.1.0 | 219.87 | 1125.90 | 1345.77 | OK | |
| r-release-linux-x86_64 | 0.1.0 | 220.51 | 1136.98 | 1357.49 | OK | |
| r-release-macos-arm64 | 0.1.0 | OK | ||||
| r-release-macos-x86_64 | 0.1.0 | 124.00 | 565.00 | 689.00 | OK | |
| r-release-windows-x86_64 | 0.1.0 | 204.00 | 737.00 | 941.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.0 | NOTE | ||||
| r-oldrel-macos-x86_64 | 0.1.0 | 126.00 | 359.00 | 485.00 | NOTE | |
| r-oldrel-windows-x86_64 | 0.1.0 | 246.00 | 838.00 | 1084.00 | OK |
Version: 0.1.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘CovarianceStructure.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘CovarianceStructure.Rmd’
--- re-building ‘SpatialExMeuseData.Rmd’ using rmarkdown
OMP: Warning #96: Cannot form a team with 24 threads, using 2 instead.
OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set).
SUMMARY: processing the following file failed:
‘SpatialExMeuseData.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [0m/90m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(clustTMB)
>
> test_check("clustTMB")
Loading required package: mclust
Package 'mclust' version 6.1.2
Type 'citation("mclust")' for citing this R package in publications.
Loading required package: MoEClust
Package 'MoEClust' version 1.6.0.
Type '?MoEClust' to see a brief guide to how to use this R package.
Type 'citation("MoEClust")' for citing the package in publications.
Type 'MoE_news()' to see new features recent changes and bug fixes.
Loading required package: mvnfast
Loading required package: FMsmsnReg
Loading required package: TMB
Note: Using Makevars in /data/gannet/ripley/.R/Makevars.cxx
using C++ compiler: 'g++ (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/clustTMB.Rcheck/tests/testthat'
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I"/data/gannet/ripley/R/test-dev/TMB/include" -I"/data/gannet/ripley/R/test-dev/RcppEigen/include" -DTMB_SAFEBOUNDS -DTMB_EIGEN_DISABLE_WARNINGS -DLIB_UNLOAD=R_unload_simple -DTMB_LIB_INIT=R_init_simple -DCPPAD_FRAMEWORK -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c ref/simple.cpp -o ref/simple.o
g++ -std=gnu++17 -shared -L/usr/local/lib64 -o ref/simple.so ref/simple.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/clustTMB.Rcheck/tests/testthat'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/clustTMB.Rcheck/tests/testthat'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/clustTMB.Rcheck/tests/testthat'
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.1.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘CovarianceStructure.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘CovarianceStructure.Rmd’
--- re-building ‘SpatialExMeuseData.Rmd’ using rmarkdown
SUMMARY: processing the following file failed:
‘SpatialExMeuseData.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.1.0
Check: installed package size
Result: NOTE
installed size is 84.4Mb
sub-directories of 1Mb or more:
libs 83.9Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64